Proteome Discoverer 3 0 User Guide Proteome Discoverer 2 2 User Guide Specifications Sheet Proteome Discoverer 2 2 System Requirements Search our database for Product Documents Manuals Product Literature Resources Application Note Optimized Search Strategy to Maximize PTM Characterization and Protein Coverage in Proteome Discoverer Software
Proteome Discoverer 3 0 software with the CHIMERYS intelligent search algorithm Current generation proteomics data analysis tools are unable to fully interpret data generated by Thermo ScientificTM OrbitrapTM mass spectrometers Proteome Discoverer 3 1 User Guide Close Share URL Print Product Tree Proteome Discoverer Software Document Type User Guide Table of contents Table of contents Collapse sidebar If the value is 0 the application automatically determines the mass tolerance Range 0 100 0 ppm default 0 ppm
Proteome Discoverer 3 0 User Guide
Proteome Discoverer 3 0 User Guide
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Proteome Discoverer 3 1 User Guide Close Share URL Print Product Tree Proteome Discoverer Software Document Type User Guide Table of contents Table of contents Collapse sidebar Collapse sidebar Search in document Return to table of contents Search content Search Load more results
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Proteome Discoverer 3 0 User Guide
News In Proteomics Research Maxquant 1 1 Vs Proteome Discoverer 1 2
Comparative Evaluation Of Proteome Discoverer And FragPipe For The TMT
Rapid Proteomics Analysis Algorithm Development Using Thermo Scientific
Proteome Discoverer 3 0 CHIMERYS
Overview Of Nodes In Proteome Discoverer Consensus Workflow To Conduct
Assembly Of The Human Proteome Reference Library HPRL Data Show
https://assets.thermofisher.com/TFS-Assets/CMD/manuals/Man-XCALI-97808-Proteome-Discoverer-User-ManXCALI97808-EN.pdf
Thermo Fisher Scientific
https://www.thermofisher.com/us/en/home/industrial/mass-spectrometry/liquid-chromatography-mass-spectrometry-lc-ms/lc-ms-software/multi-omics-data-analysis/proteome-discoverer-software.html
Thermo Scientific Proteome Discoverer software is the ultimate toolbox for protein research scientists enabling a full suite of customizable data analysis workflows for complex acquisition methods
https://docs.thermofisher.com/ArdiaPlatform/r/Proteome-Discoverer-3.1-User-Guide/en-US1297014539v1
The Proteome Discoverer application can open the FreeStyle application when it is installed on the same computer as the Proteome Discoverer application The FreeStyle application is used to visualize and qualitatively analyze mass spectrometry data You can filter the results in a variety of ways for example to produce a selected ion
https://knowledge1.thermofisher.com/Software_and_Downloads/Chromatography_and_Mass_Spectrometry_Software/Proteome_Discoverer
Thermo LCquan 3 0 Release Notes Proteome Discoverer Operator Manuals Was this article helpful Yes No Recommended articles Article type Category Proteome Discoverer Expand collapse global location Proteome Discoverer Last updated Dec 27 2021 Save as PDF Table of contents No
https://www.biotech.iastate.edu/wp_biotech/wp-content/uploads/2023/07/ProteomeDiscovererInstructions.pdf
Description name of the protein Exp Q value Displays the q values derived from the validation Sum PEP score protein score calculated as the negative logarithms of the PEP values of the connected PSMs Coverage percentage of the protein sequence covered by the peptides Peptides number of distinct peptide sequences in a protein group
The Proteome Discoverer application is a client server application that uses workflows to process and report mass spectrometry data It compares the raw data obtained via mass spectrometry to the information from a selected FASTA database and identifies peptides from tandem mass spectra Proteome Discoverer software simplifies a wide range of proteomics workflows from protein and peptide identification to PTM analysis to isobaric mass tagging and both SILAC and label free quantitation It supports multiple database search algorithms and multiple dissociation techniques
The Proteome Discoverer workflow editor allows users to create a fully customized data analysis workflow from a comprehensive menu of search algorithms dissociation methods and results filters Results can be consolidated into a single easy to read report Generate workflows for customized data analysis strategies in minutes